Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fimV_1Transmembrane Tfp pilus assembly protein FimV. (788 aa)    
Predicted Functional Partners:
truA
tRNA-pseudouridine synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
    0.778
pilN
Tfp pilus assembly protein PilN.
  
  
 0.718
pilP
Tfp pilus assembly protein PilP.
  
  
 0.716
legA
Ankyrin-repeat containing protein, substrate of the Dot/Icm secretion system.
  
     0.713
Lgor_1147
LysM domain-containing protein.
  
   
 0.705
pilO
Tfp pilus assembly protein PilO.
  
  
 0.702
pilZ_2
Type 4 fimbrial biogenesis protein PilZ.
  
     0.701
Lgor_1521
Hypothetical protein.
  
     0.686
Lgor_0455
Calcium-transporting ATPase.
  
     0.681
bcp
Acetylpolyamine aminohydrolase.
  
     0.671
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.