truA protein (Fluoribacter gormanii) - STRING interaction network

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truA

tRNA-pseudouridine synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (262 aa)

Predicted Functional Partners:

truB

0.927

trpF

0.901

rpoA

0.821

mraW

0.821

trpA

0.786

fimV_1

0.778

trpB

0.774

moeZ_1

0.757

rplQ

0.734

cysS

0.693

Your Current Organism:

Fluoribacter gormanii

NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cysS	trpA	Lgor_1446	Lgor_1444	Cysteine tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.	0.684
cysS	trpB	Lgor_1446	Lgor_1443	Cysteine tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.	0.667
cysS	trpF	Lgor_1446	Lgor_1442	Cysteine tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family.	0.635
cysS	truA	Lgor_1446	Lgor_1441	Cysteine tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	tRNA-pseudouridine synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.693
fimV_1	trpB	Lgor_1439	Lgor_1443	Transmembrane Tfp pilus assembly protein FimV.	Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.	0.447
fimV_1	trpF	Lgor_1439	Lgor_1442	Transmembrane Tfp pilus assembly protein FimV.	N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family.	0.447
fimV_1	truA	Lgor_1439	Lgor_1441	Transmembrane Tfp pilus assembly protein FimV.	tRNA-pseudouridine synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.778
moeZ_1	rplQ	Lgor_1269	Lgor_0244	Thiazole biosynthesis adenylyltransferase ThiF.	50S ribosomal protein L17.	0.450
moeZ_1	truA	Lgor_1269	Lgor_1441	Thiazole biosynthesis adenylyltransferase ThiF.	tRNA-pseudouridine synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.757
mraW	truA	Lgor_1885	Lgor_1441	S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.	tRNA-pseudouridine synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.821
rplQ	moeZ_1	Lgor_0244	Lgor_1269	50S ribosomal protein L17.	Thiazole biosynthesis adenylyltransferase ThiF.	0.450
rplQ	rpoA	Lgor_0244	Lgor_0245	50S ribosomal protein L17.	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rplQ	truA	Lgor_0244	Lgor_1441	50S ribosomal protein L17.	tRNA-pseudouridine synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.734
rplQ	truB	Lgor_0244	Lgor_0909	50S ribosomal protein L17.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.710
rpoA	rplQ	Lgor_0245	Lgor_0244	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	50S ribosomal protein L17.	0.999
rpoA	truA	Lgor_0245	Lgor_1441	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	tRNA-pseudouridine synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.821
rpoA	truB	Lgor_0245	Lgor_0909	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.724
trpA	cysS	Lgor_1444	Lgor_1446	Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.	Cysteine tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.684
trpA	trpB	Lgor_1444	Lgor_1443	Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.	Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.	0.999
trpA	trpF	Lgor_1444	Lgor_1442	Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.	N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family.	0.998

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