Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lspD_2Type II protein secretion LspD. (796 aa)    
Predicted Functional Partners:
lspE_2
Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.982
lspG
Type II secretory pathway protein LspG.
 
 0.960
lspJ
Type II secretory pathway protein LspJ.
 
  
 0.945
Lgor_1902
General secretion pathway protein C.
 
 
 0.934
lspK
Type II secretory pathway protein LspK.
 
   
 0.922
lspF
Type II secretory pathway protein LspF.
 
  
 0.915
lspI
Type II secretory pathway protein LspI.
 
 
 0.906
lspH
Type II secretory pathway protein LspH.
 
 
 0.902
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
  
 
 0.853
lspE_1
Type II protein secretion ATPase LspE.
 
 
 0.846
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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