Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgor_0655 | fabD_1 | Lgor_0655 | Lgor_1706 | acyl-CoA synthetase. | Malonyl CoA-ACP transacylase. | 0.998 |
Lgor_0655 | fabF-2 | Lgor_0655 | Lgor_0776 | acyl-CoA synthetase. | 3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.959 |
Lgor_0655 | fabF_2 | Lgor_0655 | Lgor_2714 | acyl-CoA synthetase. | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.945 |
Lgor_0655 | fabF_3 | Lgor_0655 | Lgor_0234 | acyl-CoA synthetase. | Hypothetical protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.943 |
Lgor_0655 | fadB | Lgor_0655 | Lgor_1484 | acyl-CoA synthetase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.963 |
Lgor_0655 | pksJ_1 | Lgor_0655 | Lgor_0492 | acyl-CoA synthetase. | Polyketide synthase, type I. | 0.999 |
Lgor_0655 | pksL_1 | Lgor_0655 | Lgor_0491 | acyl-CoA synthetase. | Polyketide synthase. | 0.994 |
Lgor_0655 | pksL_4 | Lgor_0655 | Lgor_2037 | acyl-CoA synthetase. | Polyketide synthase. | 0.999 |
Lgor_0655 | qor_1 | Lgor_0655 | Lgor_1533 | acyl-CoA synthetase. | Quinone oxidoreductase. | 0.883 |
Lgor_0655 | yfcX | Lgor_0655 | Lgor_3141 | acyl-CoA synthetase. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.963 |
fabD_1 | Lgor_0655 | Lgor_1706 | Lgor_0655 | Malonyl CoA-ACP transacylase. | acyl-CoA synthetase. | 0.998 |
fabD_1 | fabF-2 | Lgor_1706 | Lgor_0776 | Malonyl CoA-ACP transacylase. | 3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.999 |
fabD_1 | fabF_2 | Lgor_1706 | Lgor_2714 | Malonyl CoA-ACP transacylase. | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.998 |
fabD_1 | fabF_3 | Lgor_1706 | Lgor_0234 | Malonyl CoA-ACP transacylase. | Hypothetical protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.998 |
fabD_1 | fadB | Lgor_1706 | Lgor_1484 | Malonyl CoA-ACP transacylase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.830 |
fabD_1 | pksJ_1 | Lgor_1706 | Lgor_0492 | Malonyl CoA-ACP transacylase. | Polyketide synthase, type I. | 0.999 |
fabD_1 | pksL_1 | Lgor_1706 | Lgor_0491 | Malonyl CoA-ACP transacylase. | Polyketide synthase. | 0.993 |
fabD_1 | pksL_4 | Lgor_1706 | Lgor_2037 | Malonyl CoA-ACP transacylase. | Polyketide synthase. | 0.999 |
fabD_1 | qor_1 | Lgor_1706 | Lgor_1533 | Malonyl CoA-ACP transacylase. | Quinone oxidoreductase. | 0.833 |
fabD_1 | yfcX | Lgor_1706 | Lgor_3141 | Malonyl CoA-ACP transacylase. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.830 |
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