STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_1553Hypothetical protein. (347 aa)    
Predicted Functional Partners:
Lgor_1552
Hypothetical protein.
       0.869
fadH
2,4-dienoyl-CoA reductase.
     
 0.690
Lgor_3143
Hypothetical protein.
  
     0.610
Lgor_0671
Sphingomyelin phosphodiesterase.
  
     0.580
Lgor_0655
acyl-CoA synthetase.
    
 0.561
Lgor_1551
Permease.
       0.556
czcD
Cation efflux system protein.
  
    0.492
tehB
Tellurite resistance protein TehB.
  
  
  0.473
Lgor_2094
Hypothetical protein.
  
     0.457
lip2
Alpha/beta hydrolase.
  
 
  0.454
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.