Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgor_0652 | aidB | Lgor_0652 | Lgor_2166 | acyl-CoA dehydrogenase. | acyl-CoA dehydrogenase. | 0.634 |
Lgor_0652 | etfA | Lgor_0652 | Lgor_1564 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein, alpha subunit. | 0.957 |
Lgor_0652 | etfB | Lgor_0652 | Lgor_1563 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein beta-subunit (Beta-ETF). | 0.937 |
Lgor_0652 | etfD | Lgor_0652 | Lgor_1416 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein-ubiquinon; Accepts electrons from ETF and reduces ubiquinone. | 0.594 |
Lgor_0652 | fadB | Lgor_0652 | Lgor_1484 | acyl-CoA dehydrogenase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.980 |
Lgor_0652 | fadH | Lgor_0652 | Lgor_1659 | acyl-CoA dehydrogenase. | 2,4-dienoyl-CoA reductase. | 0.402 |
Lgor_0652 | yfcX | Lgor_0652 | Lgor_3141 | acyl-CoA dehydrogenase. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.982 |
Lgor_1353 | aidB | Lgor_1353 | Lgor_2166 | acyl-CoA dehydrogenase. | acyl-CoA dehydrogenase. | 0.647 |
Lgor_1353 | etfA | Lgor_1353 | Lgor_1564 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein, alpha subunit. | 0.975 |
Lgor_1353 | etfB | Lgor_1353 | Lgor_1563 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein beta-subunit (Beta-ETF). | 0.937 |
Lgor_1353 | etfD | Lgor_1353 | Lgor_1416 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein-ubiquinon; Accepts electrons from ETF and reduces ubiquinone. | 0.594 |
Lgor_1353 | fadB | Lgor_1353 | Lgor_1484 | acyl-CoA dehydrogenase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.977 |
Lgor_1353 | fadH | Lgor_1353 | Lgor_1659 | acyl-CoA dehydrogenase. | 2,4-dienoyl-CoA reductase. | 0.402 |
Lgor_1353 | yfcX | Lgor_1353 | Lgor_3141 | acyl-CoA dehydrogenase. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.977 |
acdA | etfA | Lgor_1242 | Lgor_1564 | Acyl CoA dehydrogenase. | Electron transfer flavoprotein, alpha subunit. | 0.979 |
acdA | etfB | Lgor_1242 | Lgor_1563 | Acyl CoA dehydrogenase. | Electron transfer flavoprotein beta-subunit (Beta-ETF). | 0.936 |
acdA | etfD | Lgor_1242 | Lgor_1416 | Acyl CoA dehydrogenase. | Electron transfer flavoprotein-ubiquinon; Accepts electrons from ETF and reduces ubiquinone. | 0.594 |
acdA | fadB | Lgor_1242 | Lgor_1484 | Acyl CoA dehydrogenase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.977 |
acdA | fadH | Lgor_1242 | Lgor_1659 | Acyl CoA dehydrogenase. | 2,4-dienoyl-CoA reductase. | 0.402 |
acdA | yfcX | Lgor_1242 | Lgor_3141 | Acyl CoA dehydrogenase. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.980 |
page 1 of 5