STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_1591Leucine carboxyl methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. (300 aa)    
Predicted Functional Partners:
Lgor_1592
Hydrolase.
 
     0.797
Lgor_3093
Leucine carboxyl methyltransferase.
  
     0.752
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
     
 0.554
Lgor_0655
acyl-CoA synthetase.
  
   
 0.531
Lgor_0889
Isoprenylcysteine carboxyl methyltransferase (ICMT) family protein.
 
     0.495
pksL_4
Polyketide synthase.
  
   
 0.477
Lgor_0477
acyl-CoA synthetase.
  
   
 0.453
pksM
Hypothetical protein.
  
     0.435
Lgor_1593
Hypothetical protein.
       0.429
Lgor_2402
Oxidoreductase.
  
  
  0.427
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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