STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankKCardiac ankyrin repeat -containing protein K. (640 aa)    
Predicted Functional Partners:
yjeA
Endo-1,4-beta-xylanase.
  
 
  0.871
Lgor_1684
L-gulono-gamma-lactone oxidase.
 
 
   0.865
Lgor_0671
Sphingomyelin phosphodiesterase.
  
 
  0.849
Lgor_3143
Hypothetical protein.
  
 
  0.822
bcp
Acetylpolyamine aminohydrolase.
  
 
  0.800
Lgor_0650
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase.
  
 
  0.799
Lgor_0455
Calcium-transporting ATPase.
  
   0.775
Lgor_0942
cNMP-binding protein.
  
 
 0.775
Lgor_0046
Ankyrin repeat protein.
  
     0.774
Lgor_0559
Ankyrin repeats (3 copies).
  
     0.774
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.