STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_1716Dolichyl-phosphate mannosyltransferase. (510 aa)    
Predicted Functional Partners:
Lgor_0655
acyl-CoA synthetase.
  
 0.841
Lgor_0628
Polysaccharide deacetylase domain-containing protein.
  
 
 0.808
Lgor_0951
Polysaccharide deacetylase.
  
 
 0.808
Lgor_1779
Polysaccharide deacetylase.
  
 
 0.808
Lgor_1990
Polysaccharide deacetylase.
  
 
 0.808
Lgor_2829
Polysaccharide deacetylase.
  
 
 0.808
Lgor_1988
Glycosyltransferase.
 
 0.807
Lgor_2177
Hypothetical protein.
  
 
 0.784
kdtA
3-deoxy-D-manno-oct-2-ulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
    
 0.761
Lgor_0823
Hypothetical protein.
 
 
 0.754
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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