Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgor_1744 | Lgor_2165 | Lgor_1744 | Lgor_2165 | Glutaredoxin 2. | Hypothetical protein. | 0.596 |
Lgor_1744 | Lgor_2225 | Lgor_1744 | Lgor_2225 | Glutaredoxin 2. | Hypothetical protein. | 0.591 |
Lgor_1744 | btuE | Lgor_1744 | Lgor_0714 | Glutaredoxin 2. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.586 |
Lgor_1744 | ggt | Lgor_1744 | Lgor_2252 | Glutaredoxin 2. | Gamma-glutamyltranspeptidase. | 0.579 |
Lgor_1744 | gor | Lgor_1744 | Lgor_0674 | Glutaredoxin 2. | Glutathione reductase. | 0.566 |
Lgor_1744 | lysS | Lgor_1744 | Lgor_1408 | Glutaredoxin 2. | lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.558 |
Lgor_1744 | rpoA | Lgor_1744 | Lgor_0245 | Glutaredoxin 2. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.833 |
Lgor_1744 | rpoB | Lgor_1744 | Lgor_0276 | Glutaredoxin 2. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.722 |
Lgor_1744 | rpoC | Lgor_1744 | Lgor_0275 | Glutaredoxin 2. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.832 |
Lgor_1744 | rpoZ | Lgor_1744 | Lgor_1256 | Glutaredoxin 2. | RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.804 |
Lgor_2165 | Lgor_1744 | Lgor_2165 | Lgor_1744 | Hypothetical protein. | Glutaredoxin 2. | 0.596 |
Lgor_2225 | Lgor_1744 | Lgor_2225 | Lgor_1744 | Hypothetical protein. | Glutaredoxin 2. | 0.591 |
btuE | Lgor_1744 | Lgor_0714 | Lgor_1744 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Glutaredoxin 2. | 0.586 |
btuE | ggt | Lgor_0714 | Lgor_2252 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Gamma-glutamyltranspeptidase. | 0.685 |
btuE | gor | Lgor_0714 | Lgor_0674 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Glutathione reductase. | 0.767 |
ggt | Lgor_1744 | Lgor_2252 | Lgor_1744 | Gamma-glutamyltranspeptidase. | Glutaredoxin 2. | 0.579 |
ggt | btuE | Lgor_2252 | Lgor_0714 | Gamma-glutamyltranspeptidase. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.685 |
ggt | gor | Lgor_2252 | Lgor_0674 | Gamma-glutamyltranspeptidase. | Glutathione reductase. | 0.650 |
gor | Lgor_1744 | Lgor_0674 | Lgor_1744 | Glutathione reductase. | Glutaredoxin 2. | 0.566 |
gor | btuE | Lgor_0674 | Lgor_0714 | Glutathione reductase. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.767 |
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