Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
araC | cyaB_1 | Lgor_2050 | Lgor_2351 | AraC family transcriptional regulator. | Guanylate cyclase. | 0.521 |
araC | cyaB_3 | Lgor_2050 | Lgor_0787 | AraC family transcriptional regulator. | Guanylate/adenylate cyclase. | 0.591 |
araC | cya_1 | Lgor_2050 | Lgor_0316 | AraC family transcriptional regulator. | Guanylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | 0.521 |
araC | letS_1 | Lgor_2050 | Lgor_0314 | AraC family transcriptional regulator. | Legionella transmission sensor LetS. | 0.413 |
araC | rpoA | Lgor_2050 | Lgor_0245 | AraC family transcriptional regulator. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.844 |
araC | tetD | Lgor_2050 | Lgor_1802 | AraC family transcriptional regulator. | AraC family transcriptional regulator. | 0.622 |
araC | thiDE | Lgor_2050 | Lgor_1268 | AraC family transcriptional regulator. | Phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.642 |
araC | trpE | Lgor_2050 | Lgor_1531 | AraC family transcriptional regulator. | Anthranilate synthase. | 0.656 |
cyaA_2 | cyaB_1 | Lgor_1467 | Lgor_2351 | Adenylate cyclase. | Guanylate cyclase. | 0.897 |
cyaA_2 | cyaB_3 | Lgor_1467 | Lgor_0787 | Adenylate cyclase. | Guanylate/adenylate cyclase. | 0.976 |
cyaA_2 | cya_1 | Lgor_1467 | Lgor_0316 | Adenylate cyclase. | Guanylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | 0.901 |
cyaA_2 | letS_1 | Lgor_1467 | Lgor_0314 | Adenylate cyclase. | Legionella transmission sensor LetS. | 0.980 |
cyaA_2 | ribA | Lgor_1467 | Lgor_1320 | Adenylate cyclase. | Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.719 |
cyaA_2 | tetD | Lgor_1467 | Lgor_1802 | Adenylate cyclase. | AraC family transcriptional regulator. | 0.694 |
cyaB_1 | araC | Lgor_2351 | Lgor_2050 | Guanylate cyclase. | AraC family transcriptional regulator. | 0.521 |
cyaB_1 | cyaA_2 | Lgor_2351 | Lgor_1467 | Guanylate cyclase. | Adenylate cyclase. | 0.897 |
cyaB_1 | cyaB_3 | Lgor_2351 | Lgor_0787 | Guanylate cyclase. | Guanylate/adenylate cyclase. | 0.973 |
cyaB_1 | cya_1 | Lgor_2351 | Lgor_0316 | Guanylate cyclase. | Guanylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | 0.682 |
cyaB_1 | letS_1 | Lgor_2351 | Lgor_0314 | Guanylate cyclase. | Legionella transmission sensor LetS. | 0.944 |
cyaB_1 | ribA | Lgor_2351 | Lgor_1320 | Guanylate cyclase. | Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.671 |
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