Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
eda | eda_1 | Lgor_0154 | Lgor_1808 | 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase. | Keto-hydroxyglutarate aldolase. | 0.687 |
eda | edd | Lgor_0154 | Lgor_0156 | 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase. | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.980 |
eda | eno | Lgor_0154 | Lgor_2886 | 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. | 0.642 |
eda | gap | Lgor_0154 | Lgor_0850 | 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.757 |
eda | glk | Lgor_0154 | Lgor_0155 | 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.925 |
eda | pdhB_1 | Lgor_0154 | Lgor_1142 | 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase. | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | 0.710 |
eda | pgi | Lgor_0154 | Lgor_1233 | 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.718 |
eda | pykA | Lgor_0154 | Lgor_0848 | 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase. | Pyruvate kinase II; Belongs to the pyruvate kinase family. | 0.707 |
eda | tpi | Lgor_0154 | Lgor_0929 | 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.637 |
eda | zwf | Lgor_0154 | Lgor_0158 | 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.942 |
eda_1 | eda | Lgor_1808 | Lgor_0154 | Keto-hydroxyglutarate aldolase. | 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase. | 0.687 |
eda_1 | edd | Lgor_1808 | Lgor_0156 | Keto-hydroxyglutarate aldolase. | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.932 |
eda_1 | eno | Lgor_1808 | Lgor_2886 | Keto-hydroxyglutarate aldolase. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. | 0.635 |
eda_1 | gap | Lgor_1808 | Lgor_0850 | Keto-hydroxyglutarate aldolase. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.736 |
eda_1 | glk | Lgor_1808 | Lgor_0155 | Keto-hydroxyglutarate aldolase. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.783 |
eda_1 | pdhB_1 | Lgor_1808 | Lgor_1142 | Keto-hydroxyglutarate aldolase. | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | 0.710 |
eda_1 | pgi | Lgor_1808 | Lgor_1233 | Keto-hydroxyglutarate aldolase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.657 |
eda_1 | pykA | Lgor_1808 | Lgor_0848 | Keto-hydroxyglutarate aldolase. | Pyruvate kinase II; Belongs to the pyruvate kinase family. | 0.654 |
eda_1 | tpi | Lgor_1808 | Lgor_0929 | Keto-hydroxyglutarate aldolase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.635 |
eda_1 | zwf | Lgor_1808 | Lgor_0158 | Keto-hydroxyglutarate aldolase. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.765 |
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