STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fleQTranscriptional regulator FleQ. (470 aa)    
Predicted Functional Partners:
cheA
Chemotaxis histidine kinase.
  
 0.970
fleN
Flagellar synthesis regulator.
 
 0.925
rpoN
RNA polymerase sigma-54 factor (sigma-L); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.893
arcB_4
Sensory histidine-kinase / response regulator.
  
 0.882
arcB_1
Sensory box histidine kinase/response regulator.
  
 0.882
letS_2
Legionella transmission sensor LetS.
  
 0.881
cyaB_3
Guanylate/adenylate cyclase.
 
 0.879
letS_1
Legionella transmission sensor LetS.
  
 0.873
fixL_2
Two-component sensor histidine kinase.
 
 
 0.845
cph2_5
Regulatory protein (GGDEF and EAL domains).
  
 0.840
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.