STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttg2DToluene tolerance protein Ttg2D. (203 aa)    
Predicted Functional Partners:
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
 
 0.992
Lgor_1832
Anti-anti-sigma factor.
  
 
 0.971
yrbE
Toluene transporter subunit: membrane component of ABC superfamily protein.
 
 
 0.946
yrbF
Toluene transporter subunit: ATP-binding component of ABC superfamily protein.
 
 
 0.937
mlaA
Lipoprotein VacJ-like protein.
 
 
 
 0.863
Lgor_0384
Mammalian cell entry related domain protein.
  
 0.845
mlaE_2
ABC transporter permease.
 
 
 0.721
Lgor_0383
Putative fused transporter subunits of ABC superfamily: ATP-binding component.
  
 
 0.679
Lgor_0385
Transport protein.
  
  
  0.632
ftsE
Cell division ATP transporter FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
 
  0.614
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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