STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_1902General secretion pathway protein C. (167 aa)    
Predicted Functional Partners:
lspD_2
Type II protein secretion LspD.
 
 
 0.934
Lgor_1901
Sel-1 protein.
 
     0.909
Lgor_0095
Type II/III secretion system protein.
 
 
 0.874
lspI
Type II secretory pathway protein LspI.
 
  
 0.843
Lgor_1026
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
   
 0.832
lspK
Type II secretory pathway protein LspK.
 
  
 0.819
Lgor_1027
General secretion pathway protein.
 
   
 0.814
lspH
Type II secretory pathway protein LspH.
 
  
 0.775
lspJ
Type II secretory pathway protein LspJ.
 
  
 0.765
lspD_1
Type II protein secretion LspD.
  
 
 0.751
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.