Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
metBCystathionine beta-lyase. (384 aa)    
Predicted Functional Partners:
cysK
Cystathionine beta-synthase.
 
 0.997
tdcB
L-threonine dehydratase catabolic TdcB.
 
 
 0.923
sahH
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
   
 0.885
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
   
 
 0.884
ahcY_1
Adenosylhomocysteinase.
   
 0.882
Lgor_1135
Aspartate aminotransferase.
   
 
 0.880
sdhL
L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.877
trxB
Thioredoxin reductase.
   
 
 0.870
pepN_1
Aminopeptidase.
   
 
 0.865
gshA
Glutamate--cysteine ligase.
    
  0.864
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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