Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgor_1994 | phnA | Lgor_1994 | Lgor_1993 | Hypothetical protein. | Alkylphosphonate uptake protein PhnA. | 0.653 |
Lgor_1994 | thiJ | Lgor_1994 | Lgor_1992 | Hypothetical protein. | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme. | 0.617 |
Lgor_1994 | yggU_1 | Lgor_1994 | Lgor_1995 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0235 family. | 0.631 |
Lgor_1996 | yggU_1 | Lgor_1996 | Lgor_1995 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0235 family. | 0.503 |
phnA | Lgor_1994 | Lgor_1993 | Lgor_1994 | Alkylphosphonate uptake protein PhnA. | Hypothetical protein. | 0.653 |
phnA | thiJ | Lgor_1993 | Lgor_1992 | Alkylphosphonate uptake protein PhnA. | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme. | 0.752 |
phnA | yggU_1 | Lgor_1993 | Lgor_1995 | Alkylphosphonate uptake protein PhnA. | Hypothetical protein; Belongs to the UPF0235 family. | 0.525 |
thiJ | Lgor_1994 | Lgor_1992 | Lgor_1994 | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme. | Hypothetical protein. | 0.617 |
thiJ | phnA | Lgor_1992 | Lgor_1993 | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme. | Alkylphosphonate uptake protein PhnA. | 0.752 |
thiJ | yggU_1 | Lgor_1992 | Lgor_1995 | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme. | Hypothetical protein; Belongs to the UPF0235 family. | 0.478 |
yggU_1 | Lgor_1994 | Lgor_1995 | Lgor_1994 | Hypothetical protein; Belongs to the UPF0235 family. | Hypothetical protein. | 0.631 |
yggU_1 | Lgor_1996 | Lgor_1995 | Lgor_1996 | Hypothetical protein; Belongs to the UPF0235 family. | Hypothetical protein. | 0.503 |
yggU_1 | phnA | Lgor_1995 | Lgor_1993 | Hypothetical protein; Belongs to the UPF0235 family. | Alkylphosphonate uptake protein PhnA. | 0.525 |
yggU_1 | thiJ | Lgor_1995 | Lgor_1992 | Hypothetical protein; Belongs to the UPF0235 family. | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme. | 0.478 |