Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgor_0185 | Lgor_0477 | Lgor_0185 | Lgor_0477 | Oxidoreductase, short-chain dehydrogenase/reductase. | acyl-CoA synthetase. | 0.879 |
Lgor_0185 | Lgor_0655 | Lgor_0185 | Lgor_0655 | Oxidoreductase, short-chain dehydrogenase/reductase. | acyl-CoA synthetase. | 0.850 |
Lgor_0185 | fabD_1 | Lgor_0185 | Lgor_1706 | Oxidoreductase, short-chain dehydrogenase/reductase. | Malonyl CoA-ACP transacylase. | 0.643 |
Lgor_0185 | fabG_1 | Lgor_0185 | Lgor_0658 | Oxidoreductase, short-chain dehydrogenase/reductase. | 3-oxoacyl-ACP reductase. | 0.746 |
Lgor_0185 | fabG_2 | Lgor_0185 | Lgor_2245 | Oxidoreductase, short-chain dehydrogenase/reductase. | 3-oxoacyl-ACP reductase. | 0.451 |
Lgor_0185 | fadB | Lgor_0185 | Lgor_1484 | Oxidoreductase, short-chain dehydrogenase/reductase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.430 |
Lgor_0185 | lgrD_2 | Lgor_0185 | Lgor_1056 | Oxidoreductase, short-chain dehydrogenase/reductase. | Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.721 |
Lgor_0185 | pksJ_1 | Lgor_0185 | Lgor_0492 | Oxidoreductase, short-chain dehydrogenase/reductase. | Polyketide synthase, type I. | 0.895 |
Lgor_0185 | yueD_2 | Lgor_0185 | Lgor_2149 | Oxidoreductase, short-chain dehydrogenase/reductase. | Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.778 |
Lgor_0477 | Lgor_0185 | Lgor_0477 | Lgor_0185 | acyl-CoA synthetase. | Oxidoreductase, short-chain dehydrogenase/reductase. | 0.879 |
Lgor_0477 | Lgor_0655 | Lgor_0477 | Lgor_0655 | acyl-CoA synthetase. | acyl-CoA synthetase. | 0.999 |
Lgor_0477 | fabD_1 | Lgor_0477 | Lgor_1706 | acyl-CoA synthetase. | Malonyl CoA-ACP transacylase. | 0.997 |
Lgor_0477 | fabG_1 | Lgor_0477 | Lgor_0658 | acyl-CoA synthetase. | 3-oxoacyl-ACP reductase. | 0.806 |
Lgor_0477 | fabG_2 | Lgor_0477 | Lgor_2245 | acyl-CoA synthetase. | 3-oxoacyl-ACP reductase. | 0.806 |
Lgor_0477 | fadB | Lgor_0477 | Lgor_1484 | acyl-CoA synthetase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.963 |
Lgor_0477 | lgrD_2 | Lgor_0477 | Lgor_1056 | acyl-CoA synthetase. | Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
Lgor_0477 | ndoR | Lgor_0477 | Lgor_2387 | acyl-CoA synthetase. | Xylene monooxygenase. | 0.829 |
Lgor_0477 | pksJ_1 | Lgor_0477 | Lgor_0492 | acyl-CoA synthetase. | Polyketide synthase, type I. | 0.999 |
Lgor_0477 | yueD_2 | Lgor_0477 | Lgor_2149 | acyl-CoA synthetase. | Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.806 |
Lgor_0655 | Lgor_0185 | Lgor_0655 | Lgor_0185 | acyl-CoA synthetase. | Oxidoreductase, short-chain dehydrogenase/reductase. | 0.850 |
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