Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgor_2155 | carA | Lgor_2155 | Lgor_1188 | Hydrogenase subunit. | Carbamoyl-phosphate synthetase, glutamine (small subunit); Belongs to the CarA family. | 0.567 |
Lgor_2155 | fadH | Lgor_2155 | Lgor_1659 | Hydrogenase subunit. | 2,4-dienoyl-CoA reductase. | 0.778 |
Lgor_2155 | hoxH | Lgor_2155 | Lgor_2152 | Hydrogenase subunit. | Coenzyme F420-reducing hydrogenase, alpha subunit. | 0.983 |
Lgor_2155 | hoxY | Lgor_2155 | Lgor_2153 | Hydrogenase subunit. | Sulfhydrogenase subunit delta. | 0.981 |
Lgor_2155 | hydG | Lgor_2155 | Lgor_2154 | Hydrogenase subunit. | Hydrogenase/sulfur reductase gamma subunit. | 0.997 |
Lgor_2155 | vhtD | Lgor_2155 | Lgor_2151 | Hydrogenase subunit. | Hydrogenase expression/formation protein. | 0.983 |
carA | Lgor_2155 | Lgor_1188 | Lgor_2155 | Carbamoyl-phosphate synthetase, glutamine (small subunit); Belongs to the CarA family. | Hydrogenase subunit. | 0.567 |
carA | fadH | Lgor_1188 | Lgor_1659 | Carbamoyl-phosphate synthetase, glutamine (small subunit); Belongs to the CarA family. | 2,4-dienoyl-CoA reductase. | 0.698 |
carA | guaA | Lgor_1188 | Lgor_1544 | Carbamoyl-phosphate synthetase, glutamine (small subunit); Belongs to the CarA family. | GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.738 |
carA | hydG | Lgor_1188 | Lgor_2154 | Carbamoyl-phosphate synthetase, glutamine (small subunit); Belongs to the CarA family. | Hydrogenase/sulfur reductase gamma subunit. | 0.859 |
carA | pyrD | Lgor_1188 | Lgor_1355 | Carbamoyl-phosphate synthetase, glutamine (small subunit); Belongs to the CarA family. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.961 |
carA | pyrE | Lgor_1188 | Lgor_2848 | Carbamoyl-phosphate synthetase, glutamine (small subunit); Belongs to the CarA family. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.942 |
carA | pyrF | Lgor_1188 | Lgor_2685 | Carbamoyl-phosphate synthetase, glutamine (small subunit); Belongs to the CarA family. | Orotidine 5`-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.942 |
fadH | Lgor_2155 | Lgor_1659 | Lgor_2155 | 2,4-dienoyl-CoA reductase. | Hydrogenase subunit. | 0.778 |
fadH | carA | Lgor_1659 | Lgor_1188 | 2,4-dienoyl-CoA reductase. | Carbamoyl-phosphate synthetase, glutamine (small subunit); Belongs to the CarA family. | 0.698 |
fadH | guaA | Lgor_1659 | Lgor_1544 | 2,4-dienoyl-CoA reductase. | GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.855 |
fadH | hoxH | Lgor_1659 | Lgor_2152 | 2,4-dienoyl-CoA reductase. | Coenzyme F420-reducing hydrogenase, alpha subunit. | 0.563 |
fadH | hoxY | Lgor_1659 | Lgor_2153 | 2,4-dienoyl-CoA reductase. | Sulfhydrogenase subunit delta. | 0.586 |
fadH | hydG | Lgor_1659 | Lgor_2154 | 2,4-dienoyl-CoA reductase. | Hydrogenase/sulfur reductase gamma subunit. | 0.944 |
fadH | pyrD | Lgor_1659 | Lgor_1355 | 2,4-dienoyl-CoA reductase. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.900 |
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