STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_2155Hydrogenase subunit. (379 aa)    
Predicted Functional Partners:
hydG
Hydrogenase/sulfur reductase gamma subunit.
 
 0.998
vhtD
Hydrogenase expression/formation protein.
 
  
 0.984
hoxY
Sulfhydrogenase subunit delta.
 
  
 0.982
hoxH
Coenzyme F420-reducing hydrogenase, alpha subunit.
 
   
 0.975
fadH
2,4-dienoyl-CoA reductase.
    
 0.837
ndoR
Xylene monooxygenase.
  
 
 0.829
pta_2
Phosphate acetyl/butaryl transferase.
     
 0.709
pta_1
Phosphate acetyl/butaryl transferase.
     
 0.709
glpD
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.686
Lgor_0655
acyl-CoA synthetase.
    
 0.663
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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