Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lgor_2156 | hypA | Lgor_2156 | Lgor_2162 | Excinuclease ABC C subunit domain-containing protein. | Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.528 |
| Lgor_2156 | hypB | Lgor_2156 | Lgor_2161 | Excinuclease ABC C subunit domain-containing protein. | Hydrogenase expression/formation protein HypB. | 0.528 |
| Lgor_2156 | hypC | Lgor_2156 | Lgor_2159 | Excinuclease ABC C subunit domain-containing protein. | Hydrogenase expression/formation protein HypC. | 0.689 |
| Lgor_2156 | hypD | Lgor_2156 | Lgor_2158 | Excinuclease ABC C subunit domain-containing protein. | Hydrogenase expression/formation protein HypD; Belongs to the HypD family. | 0.689 |
| Lgor_2156 | hypE | Lgor_2156 | Lgor_2157 | Excinuclease ABC C subunit domain-containing protein. | Hydrogenase expression/formation protein HypE. | 0.689 |
| Lgor_2156 | hypF | Lgor_2156 | Lgor_2160 | Excinuclease ABC C subunit domain-containing protein. | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.528 |
| Lgor_2156 | nixA | Lgor_2156 | Lgor_2163 | Excinuclease ABC C subunit domain-containing protein. | High-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family. | 0.489 |
| chiD | hypA | Lgor_2164 | Lgor_2162 | Chitinase. | Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.477 |
| chiD | hypB | Lgor_2164 | Lgor_2161 | Chitinase. | Hydrogenase expression/formation protein HypB. | 0.477 |
| chiD | hypF | Lgor_2164 | Lgor_2160 | Chitinase. | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.484 |
| chiD | nixA | Lgor_2164 | Lgor_2163 | Chitinase. | High-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family. | 0.510 |
| hoxH | hypD | Lgor_2152 | Lgor_2158 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase expression/formation protein HypD; Belongs to the HypD family. | 0.489 |
| hoxH | hypE | Lgor_2152 | Lgor_2157 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase expression/formation protein HypE. | 0.501 |
| hoxH | hypF | Lgor_2152 | Lgor_2160 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.534 |
| hypA | Lgor_2156 | Lgor_2162 | Lgor_2156 | Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Excinuclease ABC C subunit domain-containing protein. | 0.528 |
| hypA | chiD | Lgor_2162 | Lgor_2164 | Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Chitinase. | 0.477 |
| hypA | hypB | Lgor_2162 | Lgor_2161 | Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Hydrogenase expression/formation protein HypB. | 0.992 |
| hypA | hypC | Lgor_2162 | Lgor_2159 | Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Hydrogenase expression/formation protein HypC. | 0.937 |
| hypA | hypD | Lgor_2162 | Lgor_2158 | Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Hydrogenase expression/formation protein HypD; Belongs to the HypD family. | 0.939 |
| hypA | hypE | Lgor_2162 | Lgor_2157 | Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Hydrogenase expression/formation protein HypE. | 0.936 |
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