Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgor_2468 | Lgor_2469 | Lgor_2468 | Lgor_2469 | Acyltransferase. | Inner membrane protein AmpE. | 0.616 |
Lgor_2468 | aceE | Lgor_2468 | Lgor_2467 | Acyltransferase. | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.714 |
Lgor_2468 | aceF | Lgor_2468 | Lgor_2466 | Acyltransferase. | Pyruvate dehydrogenase (dihydrolipoyltransacetylase component) E2p; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.493 |
Lgor_2468 | kefC_2 | Lgor_2468 | Lgor_2470 | Acyltransferase. | Sodium/hydrogen antiporter. | 0.616 |
Lgor_2468 | lpdA | Lgor_2468 | Lgor_2465 | Acyltransferase. | Dihydrolipoyl dehydrogenase. | 0.443 |
Lgor_2469 | Lgor_2468 | Lgor_2469 | Lgor_2468 | Inner membrane protein AmpE. | Acyltransferase. | 0.616 |
Lgor_2469 | aceE | Lgor_2469 | Lgor_2467 | Inner membrane protein AmpE. | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.562 |
Lgor_2469 | aceF | Lgor_2469 | Lgor_2466 | Inner membrane protein AmpE. | Pyruvate dehydrogenase (dihydrolipoyltransacetylase component) E2p; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.406 |
Lgor_2469 | kefC_2 | Lgor_2469 | Lgor_2470 | Inner membrane protein AmpE. | Sodium/hydrogen antiporter. | 0.791 |
aceE | Lgor_2468 | Lgor_2467 | Lgor_2468 | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Acyltransferase. | 0.714 |
aceE | Lgor_2469 | Lgor_2467 | Lgor_2469 | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Inner membrane protein AmpE. | 0.562 |
aceE | aceF | Lgor_2467 | Lgor_2466 | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Pyruvate dehydrogenase (dihydrolipoyltransacetylase component) E2p; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.989 |
aceE | kefC_2 | Lgor_2467 | Lgor_2470 | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Sodium/hydrogen antiporter. | 0.562 |
aceE | lpdA | Lgor_2467 | Lgor_2465 | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Dihydrolipoyl dehydrogenase. | 0.967 |
aceF | Lgor_2468 | Lgor_2466 | Lgor_2468 | Pyruvate dehydrogenase (dihydrolipoyltransacetylase component) E2p; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Acyltransferase. | 0.493 |
aceF | Lgor_2469 | Lgor_2466 | Lgor_2469 | Pyruvate dehydrogenase (dihydrolipoyltransacetylase component) E2p; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Inner membrane protein AmpE. | 0.406 |
aceF | aceE | Lgor_2466 | Lgor_2467 | Pyruvate dehydrogenase (dihydrolipoyltransacetylase component) E2p; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.989 |
aceF | kefC_2 | Lgor_2466 | Lgor_2470 | Pyruvate dehydrogenase (dihydrolipoyltransacetylase component) E2p; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Sodium/hydrogen antiporter. | 0.406 |
aceF | lpdA | Lgor_2466 | Lgor_2465 | Pyruvate dehydrogenase (dihydrolipoyltransacetylase component) E2p; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Dihydrolipoyl dehydrogenase. | 0.990 |
kefC_2 | Lgor_2468 | Lgor_2470 | Lgor_2468 | Sodium/hydrogen antiporter. | Acyltransferase. | 0.616 |
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