STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
blaFEZ-1Metallo-beta-lactamase L1 precursor. (282 aa)    
Predicted Functional Partners:
Lgor_0655
acyl-CoA synthetase.
   
 0.856
moeZ_1
Thiazole biosynthesis adenylyltransferase ThiF.
 
 0.827
ndoR
Xylene monooxygenase.
     
 0.673
Lgor_2884
GNAT family acetyltransferase.
  
     0.663
ptpA_1
Prolyl oligopeptidase.
  
     0.556
gloA
Lactoylglutathione lyase.
     
 0.554
pksJ_1
Polyketide synthase, type I.
   
 
 0.551
pksL_4
Polyketide synthase.
   
 0.549
Lgor_0477
acyl-CoA synthetase.
   
 
 0.527
Lgor_0574
Putative Heparan-alpha-glucosaminide N-acetyltransferase.
  
     0.513
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.