STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
besAFerri-bacillibactin esterase BesA. (301 aa)    
Predicted Functional Partners:
Lgor_2536
Polysaccharide deacetylase.
 
     0.909
penA
Cell division protein FtsI/penicillin-binding protein 2.
 
     0.841
Lgor_2540
Putative secreted esterase.
 
  
 0.831
mecI
Methicillin resistance regulatory protein mecI.
 
     0.795
blaOXA-29
Beta-lactamase AmpS.
       0.788
yyaP_2
Methyltransferase.
 
     0.732
Lgor_2039
Eukaryotic small stress protein PASS1.
  
     0.731
Lgor_2533
5' DNA primase TraC.
 
     0.714
Lgor_2546
Aminoglycoside resistance protein; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
 
     0.697
Lgor_1848
Hypothetical protein.
  
    0.675
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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