STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_2585Putative conjugative transfer protein TrbB. (164 aa)    
Predicted Functional Partners:
msrA_2
Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.994
Lgor_2583
Putative sex pilus assembly and mating pair protein TraG.
 
     0.950
Lgor_2586
Putative conjugative transfer protein TraF.
 
     0.950
Lgor_2587
Conjugal transfer mating pair stabilization protein TraN.
 
     0.950
Lgor_2588
Putative conjugative transfer protein TrbC.
 
     0.950
Lgor_2584
Putative conjugative transfer protein TraH.
 
     0.949
Lgor_2590
Putative conjugative transfer protein TraW.
 
     0.947
traC_3
Putative conjugative transfer protein TraC.
 
     0.947
Lgor_2589
Putative conjugative transfer protein TraU.
 
     0.940
Lgor_2594
Putative conjugative transfer protein TraB.
 
     0.929
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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