STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_2597Putative conjugative transfer protein TraL. (96 aa)    
Predicted Functional Partners:
Lgor_2596
Putative conjugative transfer protein TraE.
       0.826
traA
Putative fimbrial protein precursor (Pilin).
       0.826
Lgor_2595
Putative conjugative transfer protein TraK.
       0.813
Lgor_2593
Putative Type IV conjugative transfer system protein TraV.
       0.707
Lgor_2594
Putative conjugative transfer protein TraB.
       0.697
Lgor_2591
Putative TrbI protein.
       0.648
Lgor_2589
Putative conjugative transfer protein TraU.
       0.641
traC_3
Putative conjugative transfer protein TraC.
       0.640
Lgor_2588
Putative conjugative transfer protein TrbC.
       0.639
Lgor_2585
Putative conjugative transfer protein TrbB.
       0.638
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.