Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Lgor_2617Hypothetical protein. (157 aa)    
Predicted Functional Partners:
gsiD
ABC transporter permease.
  
 0.978
Lgor_0738
Hypothetical protein.
  
 0.894
hbpA
Bacterial extracellular solute-binding protein.
  
 0.894
fimB
Type 1 fimbriae regulatory protein FimB.
       0.869
gsiA
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
  
 
 0.642
recX-2
Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family.
       0.624
artM
Putative fused transporter subunits of ABC superfamily: ATP-binding component.
     
 0.511
Lgor_2620
Topology modulation protein.
    
  0.509
lolCE
Lipoprotein-releasing system transmembrane protein LolC/E.
     
 0.484
ppnK
Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
     
  0.482
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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