STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aacA-aphD_2Aminoglycoside 6'-N-acetyltransferase. (378 aa)    
Predicted Functional Partners:
Lgor_2623
Homoserine kinase.
 
     0.942
Lgor_2642
Phosphotransferase enzyme family protein.
  
 
  0.870
Lgor_2650
Phosphotransferase enzyme family protein.
  
 
  0.863
Lgor_2620
Topology modulation protein.
 
     0.844
recX-2
Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family.
 
     0.821
pksL_3
Hypothetical protein.
  
 
  0.782
traI_2
Putative conjugative transfer protein TraI.
  
    0.778
Lgor_2640
D12 class N6 adenine-specific DNA methyltransferase.
  
     0.774
Lgor_1713
Thiamine kinase.
  
     0.773
Lgor_2230
NHL repeat protein.
  
    0.773
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.