Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
alaS_2alanyl-tRNA synthetase. (211 aa)    
Predicted Functional Partners:
Lgor_2626
YbaK / prolyl-tRNA synthetases associated domain protein.
       0.869
Lgor_2625
Hypothetical protein.
 
     0.864
Lgor_0388
Diphosphomevalonate decarboxylase.
    
   0.795
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
  
 0.687
Lgor_2628
Hypothetical protein.
       0.657
ydcN
DNA-binding transcriptional regulator.
 
     0.644
Lgor_2636
N-acetyltransferase GCN5.
 
     0.565
Lgor_2637
Putative aminoglycoside phosphotransferase.
 
     0.520
Lgor_2634
N-acetyltransferase GCN5.
 
     0.517
Lgor_2630
GNAT family acetyltransferase.
 
     0.514
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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