Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lgor_0477 | pabB | Lgor_0477 | Lgor_3172 | acyl-CoA synthetase. | Para-aminobenzoate synthase, component I. | 0.606 |
| Lgor_0477 | pheA_2 | Lgor_0477 | Lgor_1741 | acyl-CoA synthetase. | Chorismate mutase. | 0.414 |
| Lgor_0477 | trpE | Lgor_0477 | Lgor_1531 | acyl-CoA synthetase. | Anthranilate synthase. | 0.655 |
| Lgor_0477 | ubiC | Lgor_0477 | Lgor_2682 | acyl-CoA synthetase. | 4-hydroxybenzoate synthetase. | 0.677 |
| Lgor_1274 | ubiC | Lgor_1274 | Lgor_2682 | Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family. | 4-hydroxybenzoate synthetase. | 0.628 |
| Lgor_2683 | ubiA | Lgor_2683 | Lgor_2681 | Tfp type 4 fimbrial pilin related signal peptide protein domain protein. | 4-hydroxybenzoate-octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.650 |
| Lgor_2683 | ubiC | Lgor_2683 | Lgor_2682 | Tfp type 4 fimbrial pilin related signal peptide protein domain protein. | 4-hydroxybenzoate synthetase. | 0.650 |
| aroA | pabB | Lgor_2691 | Lgor_3172 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Para-aminobenzoate synthase, component I. | 0.468 |
| aroA | pheA_2 | Lgor_2691 | Lgor_1741 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Chorismate mutase. | 0.785 |
| aroA | pheA_3 | Lgor_2691 | Lgor_1201 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 2-methylcitrate synthase. | 0.990 |
| aroA | trpE | Lgor_2691 | Lgor_1531 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Anthranilate synthase. | 0.510 |
| aroA | ubiC | Lgor_2691 | Lgor_2682 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 4-hydroxybenzoate synthetase. | 0.663 |
| pabB | Lgor_0477 | Lgor_3172 | Lgor_0477 | Para-aminobenzoate synthase, component I. | acyl-CoA synthetase. | 0.606 |
| pabB | aroA | Lgor_3172 | Lgor_2691 | Para-aminobenzoate synthase, component I. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.468 |
| pabB | pheA_2 | Lgor_3172 | Lgor_1741 | Para-aminobenzoate synthase, component I. | Chorismate mutase. | 0.703 |
| pabB | pheA_3 | Lgor_3172 | Lgor_1201 | Para-aminobenzoate synthase, component I. | 2-methylcitrate synthase. | 0.821 |
| pabB | trpD | Lgor_3172 | Lgor_1843 | Para-aminobenzoate synthase, component I. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.999 |
| pabB | trpE | Lgor_3172 | Lgor_1531 | Para-aminobenzoate synthase, component I. | Anthranilate synthase. | 0.981 |
| pabB | ubiC | Lgor_3172 | Lgor_2682 | Para-aminobenzoate synthase, component I. | 4-hydroxybenzoate synthetase. | 0.609 |
| pheA_2 | Lgor_0477 | Lgor_1741 | Lgor_0477 | Chorismate mutase. | acyl-CoA synthetase. | 0.414 |
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