STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilZ_2Type 4 fimbrial biogenesis protein PilZ. (112 aa)    
Predicted Functional Partners:
gmr_2
Regulatory protein (GGDEF domain).
    
 
 0.997
cph2_5
Regulatory protein (GGDEF and EAL domains).
    
   0.997
cph2_3
Sensory box (GGDEF/EAL domain) regulatory protein.
    
  0.846
letS_1
Legionella transmission sensor LetS.
    
  0.846
pilM
Tfp pilus assembly protein, ATPase PilM.
  
   
 0.819
pilN
Tfp pilus assembly protein PilN.
  
   
 0.811
pilP
Tfp pilus assembly protein PilP.
  
   
 0.811
pilO
Tfp pilus assembly protein PilO.
  
   
 0.804
ycgG_2
Signal transduction protein (EAL/GGDEF domain protein).
    
   0.803
ycgG_1
Regulatory protein (EAL domain).
    
   0.803
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.