Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
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Co-expression
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[Homology]
Score
pilZ_2Type 4 fimbrial biogenesis protein PilZ. (112 aa)    
Predicted Functional Partners:
gmr_2
Regulatory protein (GGDEF domain).
    
 
 0.897
cph2_5
Regulatory protein (GGDEF and EAL domains).
    
   0.882
pilM
Tfp pilus assembly protein, ATPase PilM.
  
   
 0.867
pilN
Tfp pilus assembly protein PilN.
  
   
 0.828
pilP
Tfp pilus assembly protein PilP.
  
   
 0.828
pilO
Tfp pilus assembly protein PilO.
  
   
 0.824
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
  
   
 0.819
holB
DNA polymerase III, delta' subunit.
     
 0.797
pilB
Pilus assembly protein PilB.
  
 
 
 0.796
Lgor_1147
LysM domain-containing protein.
  
    0.780
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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