Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgor_0655 | acpP | Lgor_0655 | Lgor_2715 | acyl-CoA synthetase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.991 |
Lgor_0655 | fabD_1 | Lgor_0655 | Lgor_1706 | acyl-CoA synthetase. | Malonyl CoA-ACP transacylase. | 0.998 |
Lgor_0655 | fabD_2 | Lgor_0655 | Lgor_2717 | acyl-CoA synthetase. | Malonyl CoA-ACP transacylase. | 0.931 |
Lgor_0655 | fabD_3 | Lgor_0655 | Lgor_2844 | acyl-CoA synthetase. | Malonyl CoA-ACP transacylase. | 0.989 |
Lgor_0655 | fabF_2 | Lgor_0655 | Lgor_2714 | acyl-CoA synthetase. | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.945 |
Lgor_0655 | fabH_2 | Lgor_0655 | Lgor_2718 | acyl-CoA synthetase. | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.842 |
Lgor_0655 | fabH_2-2 | Lgor_0655 | Lgor_0654 | acyl-CoA synthetase. | 3-oxoacyl-ACP synthase. | 0.969 |
Lgor_0655 | fabZ | Lgor_0655 | Lgor_0029 | acyl-CoA synthetase. | (3R)-hydroxymyristoyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.774 |
Lgor_0655 | pksJ_1 | Lgor_0655 | Lgor_0492 | acyl-CoA synthetase. | Polyketide synthase, type I. | 0.999 |
Lgor_0655 | pksL_4 | Lgor_0655 | Lgor_2037 | acyl-CoA synthetase. | Polyketide synthase. | 0.999 |
acpP | Lgor_0655 | Lgor_2715 | Lgor_0655 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | acyl-CoA synthetase. | 0.991 |
acpP | fabD_1 | Lgor_2715 | Lgor_1706 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Malonyl CoA-ACP transacylase. | 0.993 |
acpP | fabD_2 | Lgor_2715 | Lgor_2717 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Malonyl CoA-ACP transacylase. | 0.967 |
acpP | fabD_3 | Lgor_2715 | Lgor_2844 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Malonyl CoA-ACP transacylase. | 0.946 |
acpP | fabF_2 | Lgor_2715 | Lgor_2714 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.968 |
acpP | fabH_2 | Lgor_2715 | Lgor_2718 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.555 |
acpP | fabH_2-2 | Lgor_2715 | Lgor_0654 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 3-oxoacyl-ACP synthase. | 0.696 |
acpP | fabZ | Lgor_2715 | Lgor_0029 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | (3R)-hydroxymyristoyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.990 |
acpP | pksJ_1 | Lgor_2715 | Lgor_0492 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Polyketide synthase, type I. | 0.790 |
acpP | pksL_4 | Lgor_2715 | Lgor_2037 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Polyketide synthase. | 0.662 |
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