STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_2745Hypothetical protein. (186 aa)    
Predicted Functional Partners:
glnA
Glutamine synthetase.
       0.776
yaaA
Hypothetical protein; Belongs to the UPF0246 family.
       0.753
pilF
Twitching motility protein PilF.
  
     0.701
lspF
Type II secretory pathway protein LspF.
       0.571
lspH
Type II secretory pathway protein LspH.
 
     0.568
pilP
Tfp pilus assembly protein PilP.
  
     0.538
lspI
Type II secretory pathway protein LspI.
 
     0.535
acdS
1-aminocyclopropane-1-carboxylate deaminase.
       0.525
lspK
Type II secretory pathway protein LspK.
 
     0.521
lspJ
Type II secretory pathway protein LspJ.
 
     0.514
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.