STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
intAIntegrase; Belongs to the 'phage' integrase family. (431 aa)    
Predicted Functional Partners:
Lgor_2768
Hypothetical protein.
       0.682
traC_2
5' DNA primase TraC.
 
     0.670
Lgor_2767
Prophage CP4-57 regulatory protein (AlpA).
 
  
 0.605
Lgor_2764
Inner membrane protein.
 
    0.562
traC
DNA primase traC.
 
     0.523
Lgor_3024
Phage-related integrase.
  
   
 0.469
Lgor_2763
Hypothetical protein.
       0.453
Lgor_2766
Hypothetical protein.
       0.453
Lgor_2762
Hypothetical protein.
       0.434
cat_1
Chloramphenicol acetyltransferase.
       0.415
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.