STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_2781Multidrug resistance efflux pump. (404 aa)    
Predicted Functional Partners:
ydhC_2
Drug resistance transporter, Bcr/CflA.
 
    0.870
frgA
Siderophore biosynthetic enzyme FrgA.
 
    0.836
Lgor_3102
Hypothetical protein.
  
     0.467
Lgor_0291
Uridine/cytidine kinase.
  
     0.458
Lgor_1583
Acyltransferase.
  
  
  0.451
Lgor_0655
acyl-CoA synthetase.
    
 0.438
Lgor_0455
Calcium-transporting ATPase.
  
     0.432
Lgor_1596
Protein kinase.
  
     0.428
Lgor_2684
Phospholipase, patatin family.
  
     0.428
Lgor_1199
Hypothetical protein.
  
     0.426
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.