Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
frgASiderophore biosynthetic enzyme FrgA. (578 aa)    
Predicted Functional Partners:
iucD
L-lysine N6-monooxygenase.
 
 
 0.929
Lgor_2781
Multidrug resistance efflux pump.
 
    0.836
ydhC_2
Drug resistance transporter, Bcr/CflA.
 
     0.810
Lgor_0655
acyl-CoA synthetase.
  
 
 0.609
chiD
Chitinase.
  
     0.601
Lgor_0091
Hypothetical protein.
  
     0.595
Lgor_1684
L-gulono-gamma-lactone oxidase.
  
     0.580
yeeA
Inner membrane protein.
  
     0.572
chiA1
Chitinase A1 precursor.
  
     0.567
Lgor_0559
Ankyrin repeats (3 copies).
  
     0.565
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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