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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_2793Ankyrin repeat protein. (1238 aa)    
Predicted Functional Partners:
Lgor_2912
Ankyrin repeats (3 copies).
  
     0.772
Lgor_2365
Ankyrin repeat protein.
  
     0.754
Lgor_1702
Ankyrin repeat protein.
  
     0.750
Lgor_0655
acyl-CoA synthetase.
  
 
 0.669
pksL_4
Polyketide synthase.
  
 
 0.611
putA
Bifunctional PutA protein (proline dehydrogenase/ delta-1-pyrroline-5-carboxylate dehydrogenase); Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
  0.609
Lgor_0865
Ankyrin repeat-containing protein.
  
     0.589
Lgor_0071
Tetratricopeptide repeat protein.
  
 
  0.588
legA
Ankyrin-repeat containing protein, substrate of the Dot/Icm secretion system.
  
     0.582
Lgor_3248
Protein phosphatase 2C.
  
 
   0.582
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.