STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grpB_2Glutamate rich protein GrpB. (313 aa)    
Predicted Functional Partners:
aph
Spectinomycin phosphotransferase.
  
     0.708
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
     
 0.608
Lgor_2799
Hypothetical protein.
       0.580
yccU
CoA-binding protein.
       0.529
citB
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain protein.
  
     0.493
Lgor_3016
Methyltransferase, ubiE/COQ5 family.
  
     0.462
Lgor_2636
N-acetyltransferase GCN5.
  
    0.453
Lgor_2023
GNAT family acetyltransferase.
  
    0.430
mta_1
Mercury resistance transcriptional regulator SkgA.
  
     0.419
Lgor_2796
Ca2+/Na+ antiporter.
       0.409
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.