Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
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Co-expression
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[Homology]
Score
Lgor_2829Polysaccharide deacetylase. (291 aa)    
Predicted Functional Partners:
Lgor_2828
GNAT family acetyltransferase.
 
     0.904
gad_2
Guanine aminohydrolase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
   
 0.746
Lgor_1716
Dolichyl-phosphate mannosyltransferase.
  
 
 0.734
Lgor_2827
7-dehydrocholesterol reductase.
       0.576
arnT
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
 
  0.472
Lgor_1299
IS2 repressor TnpA.
  
  
 0.422
Lgor_1303
Dolichol monophosphate mannose synthase.
   
 
  0.402
Lgor_1989
Glycosyl transferase.
   
 
  0.402
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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