STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_2845Acetyltransferase. (180 aa)    
Predicted Functional Partners:
yddE
Epimerase.
       0.784
pheA_3
2-methylcitrate synthase.
    
  0.660
cpsB
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
  0.643
pdhB_1
Pyruvate/2-oxoglutarate dehydrogenase subunit E1.
    
  0.629
iucD
L-lysine N6-monooxygenase.
   
 
 0.584
pta_2
Phosphate acetyl/butaryl transferase.
    
 0.553
pta_1
Phosphate acetyl/butaryl transferase.
    
 0.553
fabD_3
Malonyl CoA-ACP transacylase.
       0.500
Lgor_1111
Aminoglycoside phosphotransferase.
    
  0.460
Lgor_2642
Phosphotransferase enzyme family protein.
    
  0.460
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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