Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgor_0370 | Lgor_1713 | Lgor_0370 | Lgor_1713 | Hypothetical protein. | Thiamine kinase. | 0.772 |
Lgor_0370 | Lgor_2230 | Lgor_0370 | Lgor_2230 | Hypothetical protein. | NHL repeat protein. | 0.770 |
Lgor_0370 | Lgor_2540 | Lgor_0370 | Lgor_2540 | Hypothetical protein. | Putative secreted esterase. | 0.771 |
Lgor_0370 | Lgor_2546 | Lgor_0370 | Lgor_2546 | Hypothetical protein. | Aminoglycoside resistance protein; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. | 0.768 |
Lgor_0370 | Lgor_2640 | Lgor_0370 | Lgor_2640 | Hypothetical protein. | D12 class N6 adenine-specific DNA methyltransferase. | 0.771 |
Lgor_0370 | Lgor_2917 | Lgor_0370 | Lgor_2917 | Hypothetical protein. | Eukaryotic small stress protein PASS1. | 0.606 |
Lgor_0370 | besA | Lgor_0370 | Lgor_2535 | Hypothetical protein. | Ferri-bacillibactin esterase BesA. | 0.629 |
Lgor_0370 | traI_2 | Lgor_0370 | Lgor_2580 | Hypothetical protein. | Putative conjugative transfer protein TraI. | 0.773 |
Lgor_1713 | Lgor_0370 | Lgor_1713 | Lgor_0370 | Thiamine kinase. | Hypothetical protein. | 0.772 |
Lgor_1713 | Lgor_2230 | Lgor_1713 | Lgor_2230 | Thiamine kinase. | NHL repeat protein. | 0.774 |
Lgor_1713 | Lgor_2540 | Lgor_1713 | Lgor_2540 | Thiamine kinase. | Putative secreted esterase. | 0.774 |
Lgor_1713 | Lgor_2546 | Lgor_1713 | Lgor_2546 | Thiamine kinase. | Aminoglycoside resistance protein; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. | 0.774 |
Lgor_1713 | Lgor_2640 | Lgor_1713 | Lgor_2640 | Thiamine kinase. | D12 class N6 adenine-specific DNA methyltransferase. | 0.774 |
Lgor_1713 | Lgor_2917 | Lgor_1713 | Lgor_2917 | Thiamine kinase. | Eukaryotic small stress protein PASS1. | 0.610 |
Lgor_1713 | besA | Lgor_1713 | Lgor_2535 | Thiamine kinase. | Ferri-bacillibactin esterase BesA. | 0.659 |
Lgor_1713 | traI_2 | Lgor_1713 | Lgor_2580 | Thiamine kinase. | Putative conjugative transfer protein TraI. | 0.774 |
Lgor_2230 | Lgor_0370 | Lgor_2230 | Lgor_0370 | NHL repeat protein. | Hypothetical protein. | 0.770 |
Lgor_2230 | Lgor_1713 | Lgor_2230 | Lgor_1713 | NHL repeat protein. | Thiamine kinase. | 0.774 |
Lgor_2230 | Lgor_2540 | Lgor_2230 | Lgor_2540 | NHL repeat protein. | Putative secreted esterase. | 0.837 |
Lgor_2230 | Lgor_2546 | Lgor_2230 | Lgor_2546 | NHL repeat protein. | Aminoglycoside resistance protein; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. | 0.772 |
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