Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgor_0804 | dnaK | Lgor_0804 | Lgor_1186 | Ras family GTPase. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.547 |
Lgor_0804 | qmcA | Lgor_0804 | Lgor_2918 | Ras family GTPase. | Protease. | 0.468 |
Lgor_1850 | ftsH_1 | Lgor_1850 | Lgor_0932 | AraC family transcriptional regulator. | Cell division protease ftsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.607 |
Lgor_1850 | ftsH_2 | Lgor_1850 | Lgor_2025 | AraC family transcriptional regulator. | Protease, ATP-dependent zinc-metallo; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.607 |
Lgor_1850 | qmcA | Lgor_1850 | Lgor_2918 | AraC family transcriptional regulator. | Protease. | 0.716 |
Lgor_2140 | qmcA | Lgor_2140 | Lgor_2918 | Hypothetical protein. | Protease. | 0.468 |
Lgor_2286 | ftsH_1 | Lgor_2286 | Lgor_0932 | Hypothetical protein. | Cell division protease ftsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.557 |
Lgor_2286 | ftsH_2 | Lgor_2286 | Lgor_2025 | Hypothetical protein. | Protease, ATP-dependent zinc-metallo; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.557 |
Lgor_2286 | ptrA | Lgor_2286 | Lgor_2285 | Hypothetical protein. | Hypothetical protein. | 0.992 |
Lgor_2286 | qmcA | Lgor_2286 | Lgor_2918 | Hypothetical protein. | Protease. | 0.519 |
Lgor_2920 | nfeD | Lgor_2920 | Lgor_2919 | Coiled-coil protein. | Peptidase. | 0.485 |
Lgor_2920 | qmcA | Lgor_2920 | Lgor_2918 | Coiled-coil protein. | Protease. | 0.485 |
dnaK | Lgor_0804 | Lgor_1186 | Lgor_0804 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Ras family GTPase. | 0.547 |
dnaK | ftsH_1 | Lgor_1186 | Lgor_0932 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Cell division protease ftsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.637 |
dnaK | ftsH_2 | Lgor_1186 | Lgor_2025 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Protease, ATP-dependent zinc-metallo; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.634 |
dnaK | qmcA | Lgor_1186 | Lgor_2918 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Protease. | 0.497 |
ftsH_1 | Lgor_1850 | Lgor_0932 | Lgor_1850 | Cell division protease ftsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | AraC family transcriptional regulator. | 0.607 |
ftsH_1 | Lgor_2286 | Lgor_0932 | Lgor_2286 | Cell division protease ftsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | Hypothetical protein. | 0.557 |
ftsH_1 | dnaK | Lgor_0932 | Lgor_1186 | Cell division protease ftsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.637 |
ftsH_1 | ptrA | Lgor_0932 | Lgor_2285 | Cell division protease ftsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | Hypothetical protein. | 0.621 |
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