lprN protein (Fluoribacter gormanii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

lprN

Outer membrane efflux protein. (501 aa)

Predicted Functional Partners:

lmxE

0.962

lmxF

0.893

mdtA

0.800

emrA_2

0.661

emrA_1

0.660

emrA_3

0.645

yibH_1

0.641

bepF_1

0.609

yiaV_2

0.590

yibH_2

0.576

Your Current Organism:

Fluoribacter gormanii

NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
bepF_1	lmxF	Lgor_0220	Lgor_2993	Membrane-fusion protein involved in transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Multidrug efflux pump.	0.735
bepF_1	lprN	Lgor_0220	Lgor_2991	Membrane-fusion protein involved in transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Outer membrane efflux protein.	0.609
bepF_1	mdtA	Lgor_0220	Lgor_1044	Membrane-fusion protein involved in transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Multidrug efflux system, subunit A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.669
emrA_1	lprN	Lgor_0216	Lgor_2991	Multidrug efflux system.	Outer membrane efflux protein.	0.660
emrA_2	lprN	Lgor_1449	Lgor_2991	Multidrug efflux system.	Outer membrane efflux protein.	0.661
emrA_3	lprN	Lgor_3260	Lgor_2991	Multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Outer membrane efflux protein.	0.645
emrA_3	mdtA	Lgor_3260	Lgor_1044	Multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Multidrug efflux system, subunit A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.422
lmxE	lmxF	Lgor_2992	Lgor_2993	Efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Multidrug efflux pump.	0.950
lmxE	lprN	Lgor_2992	Lgor_2991	Efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Outer membrane efflux protein.	0.962
lmxE	yibH_2	Lgor_2992	Lgor_0646	Efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Hemolysin D.	0.561
lmxF	bepF_1	Lgor_2993	Lgor_0220	Multidrug efflux pump.	Membrane-fusion protein involved in transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.735
lmxF	lmxE	Lgor_2993	Lgor_2992	Multidrug efflux pump.	Efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.950
lmxF	lprN	Lgor_2993	Lgor_2991	Multidrug efflux pump.	Outer membrane efflux protein.	0.893
lmxF	mdtA	Lgor_2993	Lgor_1044	Multidrug efflux pump.	Multidrug efflux system, subunit A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.871
lprN	bepF_1	Lgor_2991	Lgor_0220	Outer membrane efflux protein.	Membrane-fusion protein involved in transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.609
lprN	emrA_1	Lgor_2991	Lgor_0216	Outer membrane efflux protein.	Multidrug efflux system.	0.660
lprN	emrA_2	Lgor_2991	Lgor_1449	Outer membrane efflux protein.	Multidrug efflux system.	0.661
lprN	emrA_3	Lgor_2991	Lgor_3260	Outer membrane efflux protein.	Multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.645
lprN	lmxE	Lgor_2991	Lgor_2992	Outer membrane efflux protein.	Efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.962
lprN	lmxF	Lgor_2991	Lgor_2993	Outer membrane efflux protein.	Multidrug efflux pump.	0.893

page 1 of 2

Server load: medium (52%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2026

Credits

Access

Info

About