STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aroHPhospho-2-dehydro-3-deoxyheptonate aldolase. (395 aa)    
Predicted Functional Partners:
pheA_3
2-methylcitrate synthase.
    
 0.945
pheA_1
2-methylcitrate synthase.
    
 0.878
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
 
  
 0.675
trpE
Anthranilate synthase.
  
  
 0.575
Lgor_3038
Hypothetical protein.
       0.516
Lgor_3039
Hypothetical protein.
       0.512
Lgor_3036
Hypothetical protein.
       0.496
bacD
Phosphoribosylglycinamide synthetase ATP-grasp (A) domain protein.
       0.485
ydeN
YdeN-like protein.
       0.450
Lgor_3042
Transmembrane protein.
       0.450
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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