Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_3049Inner membrane protein. (582 aa)    
Predicted Functional Partners:
traC_2
5' DNA primase TraC.
     0.926
Lgor_3048
Hypothetical protein.
  
    0.663
Lgor_0465
Hypothetical protein.
  
     0.581
Lgor_0702
Conserved protein of unknown function.
  
     0.508
Lgor_1728
Cytochrome P450.
  
     0.506
Lgor_0181
Cyclic nucleotide-binding protein.
  
     0.493
Lgor_0673
Phospholipase/lecithinase/hemolysin.
  
     0.481
Lgor_1213
NAD dependent epimerase/dehydratase.
  
     0.430
traK_2
Plasmidic transfer origin protein TraK.
     
 0.426
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.