STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_3049Inner membrane protein. (582 aa)    
Predicted Functional Partners:
traC_2
5' DNA primase TraC.
     0.919
Lgor_3048
Hypothetical protein.
  
    0.661
Lgor_0465
Hypothetical protein.
  
     0.581
Lgor_0702
Conserved protein of unknown function.
  
     0.508
Lgor_1728
Cytochrome P450.
  
     0.506
Lgor_0181
Cyclic nucleotide-binding protein.
  
     0.493
Lgor_0673
Phospholipase/lecithinase/hemolysin.
  
     0.481
Lgor_1213
NAD dependent epimerase/dehydratase.
  
     0.430
hin
Transposase (resolvase, DNA invertase).
 
   
 0.422
traK_2
Plasmidic transfer origin protein TraK.
       0.405
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.