STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgor_3088KQDN repeat-containing protein. (552 aa)    
Predicted Functional Partners:
Lgor_3083
Hypothetical protein.
 
  
 0.969
Lgor_3086
Hypothetical protein.
 
 
 0.965
Lgor_3087
TPR repeat containing protein.
 
 
 0.965
Lgor_3085
Hypothetical protein.
 
   
 0.958
Lgor_3084
Hypothetical protein.
 
   
 0.953
Lgor_3082
ATPase MoxR.
 
  
 0.850
ribA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.716
letS_1
Legionella transmission sensor LetS.
    
 0.677
cyaB_3
Guanylate/adenylate cyclase.
  
 
  0.673
cya_1
Guanylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
  0.605
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.