Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgor_0455 | Lgor_0650 | Lgor_0455 | Lgor_0650 | Calcium-transporting ATPase. | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | 0.804 |
Lgor_0455 | Lgor_0942 | Lgor_0455 | Lgor_0942 | Calcium-transporting ATPase. | cNMP-binding protein. | 0.832 |
Lgor_0455 | Lgor_1199 | Lgor_0455 | Lgor_1199 | Calcium-transporting ATPase. | Hypothetical protein. | 0.774 |
Lgor_0455 | Lgor_1583 | Lgor_0455 | Lgor_1583 | Calcium-transporting ATPase. | Acyltransferase. | 0.819 |
Lgor_0455 | Lgor_1864 | Lgor_0455 | Lgor_1864 | Calcium-transporting ATPase. | Hypothetical protein. | 0.784 |
Lgor_0455 | Lgor_3102 | Lgor_0455 | Lgor_3102 | Calcium-transporting ATPase. | Hypothetical protein. | 0.774 |
Lgor_0455 | celC | Lgor_0455 | Lgor_0782 | Calcium-transporting ATPase. | Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.774 |
Lgor_0455 | kinE | Lgor_0455 | Lgor_2609 | Calcium-transporting ATPase. | Sensor histidine kinase. | 0.771 |
Lgor_0455 | pleD-2 | Lgor_0455 | Lgor_3214 | Calcium-transporting ATPase. | Sensor histidine kinase. | 0.467 |
Lgor_0650 | Lgor_0455 | Lgor_0650 | Lgor_0455 | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | Calcium-transporting ATPase. | 0.804 |
Lgor_0650 | Lgor_0942 | Lgor_0650 | Lgor_0942 | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | cNMP-binding protein. | 0.824 |
Lgor_0650 | Lgor_1199 | Lgor_0650 | Lgor_1199 | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | Hypothetical protein. | 0.776 |
Lgor_0650 | Lgor_1583 | Lgor_0650 | Lgor_1583 | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | Acyltransferase. | 0.821 |
Lgor_0650 | Lgor_1864 | Lgor_0650 | Lgor_1864 | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | Hypothetical protein. | 0.778 |
Lgor_0650 | Lgor_3102 | Lgor_0650 | Lgor_3102 | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | Hypothetical protein. | 0.774 |
Lgor_0650 | celC | Lgor_0650 | Lgor_0782 | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.774 |
Lgor_0650 | kinE | Lgor_0650 | Lgor_2609 | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | Sensor histidine kinase. | 0.782 |
Lgor_0650 | letS_1 | Lgor_0650 | Lgor_0314 | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | Legionella transmission sensor LetS. | 0.691 |
Lgor_0650 | pleD-2 | Lgor_0650 | Lgor_3214 | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | Sensor histidine kinase. | 0.535 |
Lgor_0942 | Lgor_0455 | Lgor_0942 | Lgor_0455 | cNMP-binding protein. | Calcium-transporting ATPase. | 0.832 |
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