STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrA_3Multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (310 aa)    
Predicted Functional Partners:
emrB_2
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
 
 0.979
emrB_1
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
 
 0.910
emrB_1-2
Multidrug resistance protein, MFS superfamily.
 
  0.848
hsrA
Multidrug efflux protein; Belongs to the major facilitator superfamily.
 
 0.827
oprM_1
Outer membrane efflux protein.
 
  0.821
slyA_1
MarR family transporter transcriptional regulator.
 
  
 0.819
tolC
Outer membrane protein TolC.
 
 0.767
ttgC_2
Outer membrane efflux protein.
 
  0.705
mdtP
Outer membrane efflux lipoprotein.
  
  0.688
ttgC_4
Outer membrane efflux protein.
  
  0.679
Your Current Organism:
Fluoribacter gormanii
NCBI taxonomy Id: 464
Other names: ATCC 33297, ATCC 33342, CCUG 12267, CIP 104724, DSM 16641, DSM 25296, F. gormanii, Legionella gormanii, NCTC 11401, strain LS-13
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