STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF56636.13-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. (682 aa)    
Predicted Functional Partners:
SMF56631.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
SME98484.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.998
SMF42707.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.998
SMF20511.1
3-oxoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.998
SME98818.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.997
SME99357.1
Acetyl-CoA acetyltransferase.
  
 0.997
SMF56615.1
Acyl-CoA dehydrogenase.
 
 0.986
SMF56620.1
Acyl-CoA dehydrogenase.
 
 0.986
SMF74624.1
PAS fold-containing protein.
   
 0.981
SMF75268.1
PAS domain S-box-containing protein.
    
 0.980
Your Current Organism:
Rhizobium oryzae
NCBI taxonomy Id: 464029
Other names: Allorhizobium oryzae, Allorhizobium oryzae (Peng et al. 2008) Mousavi et al. 2016, CGMCC 1.7048, HAMBI 3197, LMG 24253, LMG:24253, R. oryzae, Rhizobium oryzae Peng et al. 2008, strain Alt 505
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