STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SME95499.1Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (360 aa)    
Predicted Functional Partners:
SME95479.1
Alpha-1,4-digalacturonate transport system permease protein.
 
  0.926
SME95487.1
Alpha-1,4-digalacturonate transport system permease protein.
 
  0.916
SMF35520.1
Multiple sugar transport system permease protein.
 
  0.838
SMF58197.1
Extracellular solute-binding protein.
  
 0.836
SMF35510.1
Multiple sugar transport system permease protein.
  
  0.826
SMF58200.1
Multiple sugar transport system permease protein.
  
  0.824
SMF72273.1
Multiple sugar transport system permease protein.
  
  0.816
SMF58204.1
Multiple sugar transport system permease protein.
  
  0.802
SMF15843.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.799
SMF07374.1
Sorbitol ABC transporter membrane protein.
  
  0.795
Your Current Organism:
Rhizobium oryzae
NCBI taxonomy Id: 464029
Other names: Allorhizobium oryzae, Allorhizobium oryzae (Peng et al. 2008) Mousavi et al. 2016, CGMCC 1.7048, HAMBI 3197, LMG 24253, LMG:24253, R. oryzae, Rhizobium oryzae Peng et al. 2008, strain Alt 505
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.